Over the last months, I have been monitoring in disbelief the number of “comments-spams ” that hit my website: 4,464 since March 23. Too me, it is way too many for a website that gets an average of 10 legitimate visits per days. I absolutely can’t wrap my mind around the fact that somewhere an army of bots/zombie PC are burning a lot of CPU and bandwidth to vomit a load of nonsense comments on websites…Thankfully, the spam gets caught in powerful filters such as Akismet. So far 99.955% of the comments are junk on my site…It leads to the question: “How much energy can we save if we take down all the spam-servers?, how much bandwidth can we save?

I finally put together a quickly made movie about some of my flights in California. As you may know by now, is that I love flying. But I love even more sharing it with friends. This video is all about the great times I had so far with my friends, flying around just for the heck of flying or for sightseeing from the sky. California is awesome (obviously), but it is even better from high above…

I recently came across this excellent commentary by Brian Matthews on the 5 (five…) papers Chang et al. retracted back in 2006. For those not familiar with X-ray crystallography and the Changs papers withdraw from leading scientific publishers, I give you a bit of explanation. X-ray crystallography is the gold standard in structure determination and it uses a crystal of pure molecular specie(s) shot through an X-ray beam. If the crystal is good, the electron clouds of the atoms diffract the x-ray beam. By recording various diffractions images, one can compute the electron density inside the crystal and trace (build) the molecular specie(s) in it. Sound simple enough? actually no. I’m not talking here about the maths and physics involved and the phasing problem. The essence of  X-ray crystallography is to solve the phase problem leading to having “good” and “reliable” maps of electron density.

What happened to Chang et al., is that they were working with some wrong electron density maps because of a gross error made early-on during the project pipeline. The culprit was an in-house data reduction program that switched critical column of data. Because of this error, they build/trace various proteins with the “wrong” hand.

Brian Matthews commentary is a solid X-ray crystallography 101 lesson. A lot have been said and written about Chang et al. mistake and their consequences. But, Brian Matthews point out that nowadays we are seeing an ever-increasing use of “black-box” procedures for structure determinations. The rapid development of easy to use X-ray crystallography softwares along with massive computing power render the structure determination fairly easy for one with limited X-ray crystallography knowledge. Solving a structure can be fairly straightforward but it can easily become a tricky task. In any cases but especially in tricky cases, one needs to be extremely cautious about the validity of the maps. Brian Matthews gave us a great lesson about the various checking we all should do when dealing with problems encountered by Chang et al.

X-ray crystallography is like anything else, it is an art. It requires experience, failures, learning from failures and constant knowledge update. Like everything else in Science, it is a grave mistake to assume that we master all the whereabouts of a technology/methodology. I guess, Chang et al. learnt it the hard way. However it raises another question: Shall we seek advice from a peer to help solving a problem in case of dealing with a very hot project? All the 5 retracted papers were all hot projects…

The take home message from this is to be über-cautious and don’t take nice looking maps for granted…

Already 40 years…already 40 years that what is perhaps the greatest achievement of mankind, led to having the very first earthling fooling around on the moon. It was the ultimate achievement of one entire nation fulfilling J.F Kennedy promise back in 1961. A 3 stage-programs (Mercury, Gemini and Apollo) and billions of dollars spend, led not only to having men on the moon but also great scientific progress and to an extraordinary technological leap forward, skyrocketing the entire world into today’s reality. We can thank the cold war for fuelling a frantic space race between the USA and USSR. But the legacy of such space race is massive and everywhere in our today’s life.  Going to space and to the moon required a handful of technology that we didn’t have. Where to start?  The benefits of the space program are virtually everywhere.  For instance, home insulation, cordless power tools appliances, LED light, laser, lightning protection, shades, robotic, portable breathing system among many others. UNIX is also a spinoff of the space program.

Most of all, the space program and the most of all the lunar explorations by Apollo 11 to 17 (except 13) provides an extraordinary reservoir of dreams for billions of earthlings…for decades. Which kid doesn’t want to be an astronaut as some point? Which one of us didn’t say  ”I wish it was me on that freaking Space shuttle even if I have to throw-up during the 15 days of the mission? right?

As for myself, that brings me to get an airplane pilot license and to apply to the European Space Agency astronaut selection program in June ’08. Luckily, I got selected and I touched for a little bit of what being an astronaut could be while having my butt kicked during the tests in Germany.

Apollo 11 Landing anniversary must remind us that we should not stop investing in great and ambitious programs such as the space exploration. On another level, the Concorde program brought many technical achievement that are not only in use in all nowadays airliners but in all vehicles, computers, etc…. Just as a reminder, at the time of the Concorde program, only very few military aircraft were able to sustain mach 2+. Concorde was able to comfortably cruise at mach 2.02 for 2+ hours at 60.000ft…advanced military aircraft territory.

To realize how great it was, let’s imagine that the mighty SR-71 blackbird was probably the only aircraft able to overtake the Concorde during a transatlantic crossing without refueling. The legend wants that one day somewhere over the Atlantic an SR-71 blackbird flying at mach 3 was overtaking a Concorde cruising below at mach 2. The crew of the blackbird suddenly realized that they were sweaty, tired and strapped in a rather uncomfortable space-suit, breathing cold and dry oxygen while just below, 100 passengers flying at twice the speed of sound, where having foie gras, caviars and delicious Champagne…In a similar manner of the Apollo program France and UK spend billions to make Concorde a reality.

As today’s economy is going side-ways, it is the time to massively invest in very ambitious programs during the coming years. Tomorrow’s world will thank us later.

I just come back from a very pleasant trip to South-Korea where I visited the Kyungpook National University (KNU) in Daegu. A very nice and inspiring trip overall. I met great individuals both at the university and off-campus with whom I had very very interesting chats. I definitively need to spend more time in Korea. Unfortunately, I haven’t seen much of it because of a too short of a trip.

Happy 4th of july! This year we kinda missed the first minutes of the fireworks. We sat in our comfy folding chairs to enjoy the rest of the show though. It was nice, but I have the feeling it was shorter than the previous years…Are fireworks another victims of the crappy economy?

The battery of our fancy HDD camcorder ran out of juice in the middle of the show….here the grand finale shot with my iPhone. Not too shabby isn’t?